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full length 16s rrna gene sequences  (ATCC)


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    ATCC full length 16s rrna gene sequences
    Full Length 16s Rrna Gene Sequences, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 6294 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/16s+rrna+gene+sequences/16S/pm42240770-137-4-21
    Average 99 stars, based on 6294 article reviews
    full length 16s rrna gene sequences - by Bioz Stars, 2026-09
    99/100 stars

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    Related Articles

    other:

    Article Title: Isolation and characterization of a novel strain, Paenibacillus lacisediminis sp. nov., exhibiting both biomacromolecule degradation and plant growth-beneficial activities.
    Article Snippet: 35 / 42 Fig. 1 Neighbour-joining tree, based on 16S rRNA gene sequences, showing the relationship between strain Paenibacillus lacisediminis TH7-28 T with P. macerans ATCC 8244 T , P. oralis KCOM 3021 T , and other closely related strains.

    Article Title: Genomic insights into a novel species, Dyella thailandensis sp. nov., a cellulolytic and xylanolytic bacterium isolated from soil associated with leaf compost.
    Article Snippet: Maximum-likelihood phylogenetic tree based on 16S rRNA gene sequences illustrating position of strain KULCS107T relative to all closely related species of the genera Dyella and Frateuria, with Xanthomonas campestris ATCC 33913T as the outgroup.

    Comparison:

    Article Title: Reporting two novel Kluyvera species, Kluyvera huaxiensis and Kluyvera chengduensis , isolated from human sputa
    Article Snippet: .. Comparison of 16S rRNA gene sequences showed that strain 142053 T and 142359 T exhibited high similarity to Kluyvera intermedia NBRC 102594 T (99.48%) and Kluyvera georgiana ATCC 51603 T (98.68%), respectively. ..

    Sequencing:

    Article Title: Genomic insights into a novel species, Dyella thailandensis sp. nov., a cellulolytic and xylanolytic bacterium isolated from soil associated with leaf compost
    Article Snippet: .. In the resulting trees, the strain formed a distinct phylogenetic lineage with its closest relative, D. ginsengisoli Gsoil 3046 T . Since the 16S rRNA gene sequence identity between these 2 strains exceeds the 98.65% threshold commonly used for species delineation , further genome-based analyses were performed to clarify the taxonomic status of strain KULCS107 T . Fig. 1 Maximum-likelihood phylogenetic tree based on 16S rRNA gene sequences illustrating position of strain KULCS107 T relative to all closely related species of the genera Dyella and Frateuria , with Xanthomonas campestris ATCC 33913 T as the outgroup. ..

    Article Title: Litorerythrobacter xanthomarinus gen. nov., sp. nov., a novel marine bacterium with distinct phenotypic traits from tidal mudflat sediment.
    Article Snippet: A Gram-negative, aerobic, non-motile, ovoid bacterium, designated strain MF3-039T, was isolated from tidal mudflat sediment sampled in Gunsan, Republic of Korea.. The strain formed yellow-pigmented colonies on marine agar and was positive for catalase and oxidase.. It grew at temperatures ranging from 10 to 37 °C (optimum, 25 °C), pH levels from 6.0 to 9.0 (optimum, 7.0), and 0 to 7.0% (w/v) NaCl (optimum, 2.0%).

    Article Title: Novel Koutsourovirus phages disrupt clinical multidrug-resistant Enterobacter cloacae biofilms: genomic and functional characterization.
    Article Snippet: Infections caused by antimicrobial-resistant (AMR) bacteria represent a growing global health threat, with mortality rates projected to rise drastically unless innovative therapeutic strategies are adopted (Lebeaux et al. 2014).. Enterobacter spp., a member of the ESKAPE pathogens, is a commensal microorganism of the gastrointestinal tracts of humans and animals (Murray et al. 2022).. However, it also acts as an opportunistic pathogen, capable of causing severe and sometimes fatal infections (Mezzatesta et al. 2012; Potron et al. 2013; Lebeaux et al. 2014).

    Article Title: Quantitative PCR-Based Analysis of Bacterial Profiles in Periapical Lesions and Maxillary Sinus in Odontogenic Sinusitis
    Article Snippet: .. Then, the 16S rRNA gene sequences from each group were retrieved from the ATCC Genome Portal [ ], NCBI Reference Sequence Database [ , ] and GenBank [ ]. .. Multiple alignments were performed using Clustal Omega with default settings [ , ], and visualized with Jalview version 2.11.1.3 [ ].

    Article Title: Genome-based reclassification of Chromohalobacter japonicus Sánchez-Porro et al. 2007 as a later heterotypic synonym of Chromohalobacter beijerinckii Peçonek et al. 2006.
    Article Snippet: In this study, whole-genome analyses were employed to resolve the taxonomic status of two closely related Chromohalobacter species.. Among the eight type strains with publicly available data, C. beijerinckii Peçonek et al. (Int J Syst Evol Microbiol 56:1953–1957, 2006) and C. japonicus SánchezPorro et al. (Int J Syst Evol Microbiol 57:2262–2266, 2007) repeatedly converged as a single evolutionary unit.. The 16S rRNA gene sequences of C. beijerinckii ATCC 19372 T and C. japonicus 43 T possess 99.26% sequence similarity.

    Software:

    Article Title: Novel Koutsourovirus phages disrupt clinical multidrug-resistant Enterobacter cloacae biofilms: genomic and functional characterization.
    Article Snippet: Infections caused by antimicrobial-resistant (AMR) bacteria represent a growing global health threat, with mortality rates projected to rise drastically unless innovative therapeutic strategies are adopted (Lebeaux et al. 2014).. Enterobacter spp., a member of the ESKAPE pathogens, is a commensal microorganism of the gastrointestinal tracts of humans and animals (Murray et al. 2022).. However, it also acts as an opportunistic pathogen, capable of causing severe and sometimes fatal infections (Mezzatesta et al. 2012; Potron et al. 2013; Lebeaux et al. 2014).



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    Biotechnology Information 16s rrna gene sequencing data
    Predicted functional pathways based on KEGG annotations associated with H. pylori infection and eradication status. (A) Relative representation of predicted pathways between H. pylori –negative and H. pylori –positive samples **, P < 0.01; ***, P < 0.001 for two-group comparison. (B) Relative changes in predicted functional pathways between baseline and follow-up samples across eradicated, recurrent GC after eradication, and non-eradicated groups. Functional profiles were predicted from <t>16S</t> <t>rRNA</t> gene sequencing data using KEGG-based pathway inference. *, P < 0.05; ***, P < 0.001 for comparison between baseline and follow-up in each group. KEGG, Kyoto Encyclopedia of Genes and Genomes.
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    Azenta 16s rrna gene sequencing
    Heatmap showing the relative abundance of identified PGPR-associated metabolic pathways across five samples (Root_13, Root_14, Humus_4 (surface), Humus_5 (middle depth), and Humus_6 (deep), inferred from <t>16S</t> <t>rRNA</t> gene sequencing data using PICRUSt2. Pathways are hierarchically clustered (dendrograms) based on similarity in predicted functional profiles. The color gradient represents normalized relative abundance values, ranging from −1 (blue, lower abundance) to 1.5 (red, higher abundance), with intermediate levels shown in white/yellow.
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    Predicted functional pathways based on KEGG annotations associated with H. pylori infection and eradication status. (A) Relative representation of predicted pathways between H. pylori –negative and H. pylori –positive samples **, P < 0.01; ***, P < 0.001 for two-group comparison. (B) Relative changes in predicted functional pathways between baseline and follow-up samples across eradicated, recurrent GC after eradication, and non-eradicated groups. Functional profiles were predicted from 16S rRNA gene sequencing data using KEGG-based pathway inference. *, P < 0.05; ***, P < 0.001 for comparison between baseline and follow-up in each group. KEGG, Kyoto Encyclopedia of Genes and Genomes.

    Journal: Frontiers in Cellular and Infection Microbiology

    Article Title: Longitudinal remodeling of gastric microbiota following Helicobacter pylori eradication reveals an eradication-associated microbial signature in gastric cancer

    doi: 10.3389/fcimb.2026.1848437

    Figure Lengend Snippet: Predicted functional pathways based on KEGG annotations associated with H. pylori infection and eradication status. (A) Relative representation of predicted pathways between H. pylori –negative and H. pylori –positive samples **, P < 0.01; ***, P < 0.001 for two-group comparison. (B) Relative changes in predicted functional pathways between baseline and follow-up samples across eradicated, recurrent GC after eradication, and non-eradicated groups. Functional profiles were predicted from 16S rRNA gene sequencing data using KEGG-based pathway inference. *, P < 0.05; ***, P < 0.001 for comparison between baseline and follow-up in each group. KEGG, Kyoto Encyclopedia of Genes and Genomes.

    Article Snippet: The raw 16S rRNA gene sequencing data generated in this study have been deposited in the National Center for Biotechnology Information Sequence Read Archive under the BioProject accession number PRJNA1447187 and are publicly available at http://www.ncbi.nlm.nih.gov/bioproject/1447187 .

    Techniques: Functional Assay, Infection, Comparison, Sequencing

    Heatmap showing the relative abundance of identified PGPR-associated metabolic pathways across five samples (Root_13, Root_14, Humus_4 (surface), Humus_5 (middle depth), and Humus_6 (deep), inferred from 16S rRNA gene sequencing data using PICRUSt2. Pathways are hierarchically clustered (dendrograms) based on similarity in predicted functional profiles. The color gradient represents normalized relative abundance values, ranging from −1 (blue, lower abundance) to 1.5 (red, higher abundance), with intermediate levels shown in white/yellow.

    Journal: bioRxiv

    Article Title: Taxonomic Composition and Predicted Functional Potential of a Commercial Microbiome-Based Fertilizer Additive and Agricultural Soils in Eastern Paraguay

    doi: 10.64898/2026.06.03.729874

    Figure Lengend Snippet: Heatmap showing the relative abundance of identified PGPR-associated metabolic pathways across five samples (Root_13, Root_14, Humus_4 (surface), Humus_5 (middle depth), and Humus_6 (deep), inferred from 16S rRNA gene sequencing data using PICRUSt2. Pathways are hierarchically clustered (dendrograms) based on similarity in predicted functional profiles. The color gradient represents normalized relative abundance values, ranging from −1 (blue, lower abundance) to 1.5 (red, higher abundance), with intermediate levels shown in white/yellow.

    Article Snippet: 16S rRNA gene sequencing was performed by Azenta Life Sciences (South Plainfield, NJ, USA) using their 16S-EZ service.

    Techniques: Sequencing, Functional Assay